Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.83■□□□□ 0.44
ERCC2P18074 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.83■□□□□ 0.44
ERCC2P18074 AL022326.1-202ENST00000641533 845 ntBASIC17.83■□□□□ 0.44
ERCC2P18074 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ERCC2P18074 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.83■□□□□ 0.44
ERCC2P18074 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.83■□□□□ 0.44
ERCC2P18074 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC2P18074 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.82■□□□□ 0.44
ERCC2P18074 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 EMBP1-201ENST00000458200 901 ntBASIC17.82■□□□□ 0.44
ERCC2P18074 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.82■□□□□ 0.44
ERCC2P18074 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.82■□□□□ 0.44
ERCC2P18074 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ERCC2P18074 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC2P18074 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC2P18074 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC2P18074 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC2P18074 LINC02012-201ENST00000608206 1725 ntBASIC17.81■□□□□ 0.44
ERCC2P18074 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC2P18074 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.81■□□□□ 0.44
ERCC2P18074 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 ACTG1P4-201ENST00000425123 1122 ntBASIC17.81■□□□□ 0.44
ERCC2P18074 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC2P18074 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.81■□□□□ 0.44
ERCC2P18074 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC2P18074 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ERCC2P18074 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC2P18074 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ERCC2P18074 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC2P18074 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC2P18074 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC2P18074 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ERCC2P18074 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC2P18074 LINC00982-205ENST00000420957 435 ntBASIC17.8■□□□□ 0.44
ERCC2P18074 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC2P18074 AL450487.1-201ENST00000426799 995 ntBASIC17.8■□□□□ 0.44
ERCC2P18074 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms