Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
BRAFP15056 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
BRAFP15056 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
BRAFP15056 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.85■□□□□ 0.45
BRAFP15056 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BRAFP15056 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.85■□□□□ 0.45
BRAFP15056 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.85■□□□□ 0.45
BRAFP15056 ATP5G2P1-201ENST00000433580 426 ntBASIC17.85■□□□□ 0.45
BRAFP15056 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.85■□□□□ 0.45
BRAFP15056 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BRAFP15056 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.85■□□□□ 0.45
BRAFP15056 KRT8P26-201ENST00000534154 1276 ntBASIC17.85■□□□□ 0.45
BRAFP15056 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.85■□□□□ 0.45
BRAFP15056 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.85■□□□□ 0.45
BRAFP15056 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.85■□□□□ 0.45
BRAFP15056 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 AL121672.3-201ENST00000608644 468 ntBASIC17.85■□□□□ 0.45
BRAFP15056 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.85■□□□□ 0.45
BRAFP15056 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BRAFP15056 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.85■□□□□ 0.45
BRAFP15056 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BRAFP15056 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAFP15056 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BRAFP15056 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BRAFP15056 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.84■□□□□ 0.45
BRAFP15056 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 KRT89P-201ENST00000620027 1478 ntBASIC17.84■□□□□ 0.45
BRAFP15056 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.84■□□□□ 0.45
BRAFP15056 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.84■□□□□ 0.45
BRAFP15056 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 IGHGP-201ENST00000390555 1178 ntBASIC17.84■□□□□ 0.45
BRAFP15056 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 AP002383.4-201ENST00000442518 975 ntBASIC17.84■□□□□ 0.45
BRAFP15056 TSSC2-201ENST00000450217 709 ntBASIC17.84■□□□□ 0.45
BRAFP15056 BX276092.5-203ENST00000456199 560 ntBASIC17.84■□□□□ 0.45
BRAFP15056 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.84■□□□□ 0.45
BRAFP15056 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
BRAFP15056 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BRAFP15056 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.84■□□□□ 0.45
BRAFP15056 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAFP15056 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRAFP15056 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
BRAFP15056 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
BRAFP15056 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.83■□□□□ 0.45
BRAFP15056 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.83■□□□□ 0.45
BRAFP15056 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRAFP15056 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
BRAFP15056 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
BRAFP15056 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.83■□□□□ 0.44
BRAFP15056 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.83■□□□□ 0.44
BRAFP15056 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.83■□□□□ 0.44
BRAFP15056 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.83■□□□□ 0.44
BRAFP15056 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.83■□□□□ 0.44
BRAFP15056 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.83■□□□□ 0.44
BRAFP15056 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.83■□□□□ 0.44
BRAFP15056 GPR32P1-201ENST00000601788 811 ntBASIC17.83■□□□□ 0.44
BRAFP15056 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BRAFP15056 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms