Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDH1P12830 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH1P12830 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH1P12830 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH1P12830 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH1P12830 PRELID1P1-202ENST00000567272 903 ntBASIC16.92■□□□□ 0.3
CDH1P12830 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH1P12830 AC012313.10-201ENST00000623509 926 ntBASIC16.92■□□□□ 0.3
CDH1P12830 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH1P12830 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH1P12830 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH1P12830 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 AC046158.3-201ENST00000624947 2558 ntBASIC16.91■□□□□ 0.3
CDH1P12830 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 LYSMD4-203ENST00000378904 2122 ntBASIC16.91■□□□□ 0.3
CDH1P12830 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CDH1P12830 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH1P12830 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDH1P12830 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 NUS1P1-201ENST00000446295 882 ntBASIC16.91■□□□□ 0.3
CDH1P12830 KRT18P56-201ENST00000507275 550 ntBASIC16.91■□□□□ 0.3
CDH1P12830 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH1P12830 AC111152.3-201ENST00000569699 673 ntBASIC16.91■□□□□ 0.3
CDH1P12830 MIR5100-201ENST00000579544 119 ntBASIC16.91■□□□□ 0.3
CDH1P12830 CLEC4GP1-201ENST00000596555 870 ntBASIC16.91■□□□□ 0.3
CDH1P12830 AL591684.3-201ENST00000605187 298 ntBASIC16.91■□□□□ 0.3
CDH1P12830 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH1P12830 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH1P12830 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
CDH1P12830 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH1P12830 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH1P12830 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.91■□□□□ 0.3
CDH1P12830 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CDH1P12830 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CDH1P12830 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDH1P12830 KRT16P4-201ENST00000453883 522 ntBASIC16.9■□□□□ 0.3
CDH1P12830 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH1P12830 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.9■□□□□ 0.3
CDH1P12830 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH1P12830 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH1P12830 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.9■□□□□ 0.3
CDH1P12830 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH1P12830 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH1P12830 AL139327.4-201ENST00000612362 153 ntBASIC16.9■□□□□ 0.3
CDH1P12830 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDH1P12830 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH1P12830 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms