Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.33■□□□□ 0.68
RARBP10826 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARBP10826 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARBP10826 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RARBP10826 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.33■□□□□ 0.68
RARBP10826 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RARBP10826 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RARBP10826 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.32■□□□□ 0.68
RARBP10826 AC005237.2-201ENST00000434368 219 ntBASIC19.32■□□□□ 0.68
RARBP10826 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.32■□□□□ 0.68
RARBP10826 SPDYE11-202ENST00000450699 704 ntBASIC19.32■□□□□ 0.68
RARBP10826 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RARBP10826 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.32■□□□□ 0.68
RARBP10826 SPDYE9P-201ENST00000570642 692 ntBASIC19.32■□□□□ 0.68
RARBP10826 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.32■□□□□ 0.68
RARBP10826 REXO1L9P-201ENST00000604264 2108 ntBASIC19.32■□□□□ 0.68
RARBP10826 SPDYE10P-202ENST00000612005 668 ntBASIC19.32■□□□□ 0.68
RARBP10826 SPDYE8P-202ENST00000612377 668 ntBASIC19.32■□□□□ 0.68
RARBP10826 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.32■□□□□ 0.68
RARBP10826 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 Z92544.3-201ENST00000624747 417 ntBASIC19.32■□□□□ 0.68
RARBP10826 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.32■□□□□ 0.68
RARBP10826 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 AL135999.2-201ENST00000622438 1686 ntBASIC19.32■□□□□ 0.68
RARBP10826 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
RARBP10826 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RARBP10826 AC046185.3-201ENST00000623228 1824 ntBASIC19.32■□□□□ 0.68
RARBP10826 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.32■□□□□ 0.68
RARBP10826 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARBP10826 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RARBP10826 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RARBP10826 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RARBP10826 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 AP000997.3-201ENST00000623333 2250 ntBASIC19.31■□□□□ 0.68
RARBP10826 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.31■□□□□ 0.68
RARBP10826 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 AC087163.2-201ENST00000457299 853 ntBASIC19.31■□□□□ 0.68
RARBP10826 SLC25A6P2-201ENST00000497974 877 ntBASIC19.31■□□□□ 0.68
RARBP10826 AC069262.1-201ENST00000539058 672 ntBASIC19.31■□□□□ 0.68
RARBP10826 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.31■□□□□ 0.68
RARBP10826 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.31■□□□□ 0.68
RARBP10826 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.31■□□□□ 0.68
RARBP10826 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.31■□□□□ 0.68
RARBP10826 AJ011932.1-201ENST00000621707 465 ntBASIC19.31■□□□□ 0.68
RARBP10826 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RARBP10826 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARBP10826 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RARBP10826 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.31■□□□□ 0.68
RARBP10826 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.3■□□□□ 0.68
RARBP10826 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RARBP10826 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.3■□□□□ 0.68
RARBP10826 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 AC005332.8-201ENST00000622750 2735 ntBASIC19.3■□□□□ 0.68
RARBP10826 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARBP10826 PMS2P4-201ENST00000412466 1052 ntBASIC19.3■□□□□ 0.68
RARBP10826 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.3■□□□□ 0.68
RARBP10826 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.3■□□□□ 0.68
RARBP10826 AC093214.1-201ENST00000511688 1107 ntBASIC19.3■□□□□ 0.68
RARBP10826 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms