Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 KRT17P6-201ENST00000453795 1220 ntBASIC15.42■□□□□ 0.06
ERCC1P07992 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.42■□□□□ 0.06
ERCC1P07992 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
ERCC1P07992 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ERCC1P07992 AC012313.10-201ENST00000623509 926 ntBASIC15.42■□□□□ 0.06
ERCC1P07992 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 CROCCP2-202ENST00000412962 2773 ntBASIC15.42■□□□□ 0.06
ERCC1P07992 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
ERCC1P07992 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ERCC1P07992 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ERCC1P07992 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ERCC1P07992 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC1P07992 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC1P07992 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.41■□□□□ 0.06
ERCC1P07992 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC1P07992 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.41■□□□□ 0.06
ERCC1P07992 AC099336.1-202ENST00000602961 463 ntBASIC15.41■□□□□ 0.06
ERCC1P07992 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ERCC1P07992 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ERCC1P07992 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC1P07992 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.41■□□□□ 0.06
ERCC1P07992 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC1P07992 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC1P07992 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 AC022211.2-201ENST00000585075 2527 ntBASIC15.4■□□□□ 0.06
ERCC1P07992 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC1P07992 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 FOSL1P1-201ENST00000511041 816 ntBASIC15.4■□□□□ 0.06
ERCC1P07992 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.4■□□□□ 0.06
ERCC1P07992 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 AC138894.3-201ENST00000603787 634 ntBASIC15.4■□□□□ 0.06
ERCC1P07992 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.4■□□□□ 0.06
ERCC1P07992 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.4■□□□□ 0.06
ERCC1P07992 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ERCC1P07992 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ERCC1P07992 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC1P07992 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC1P07992 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC1P07992 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms