Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CTSDP07339 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CTSDP07339 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSDP07339 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSDP07339 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.42□□□□□ -0.1
CTSDP07339 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSDP07339 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 AC008741.2-201ENST00000612792 3115 ntBASIC14.41□□□□□ -0.1
CTSDP07339 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.41□□□□□ -0.1
CTSDP07339 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 AP000523.1-201ENST00000398242 1049 ntBASIC14.41□□□□□ -0.1
CTSDP07339 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 AC096633.1-201ENST00000422446 749 ntBASIC14.41□□□□□ -0.1
CTSDP07339 AC128688.1-201ENST00000487626 519 ntBASIC14.41□□□□□ -0.1
CTSDP07339 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.41□□□□□ -0.1
CTSDP07339 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CTSDP07339 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSDP07339 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CTSDP07339 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.41□□□□□ -0.1
CTSDP07339 KRT17P2-201ENST00000300992 1314 ntBASIC14.41□□□□□ -0.1
CTSDP07339 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.4□□□□□ -0.1
CTSDP07339 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CTSDP07339 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 MIR4497-201ENST00000583208 89 ntBASIC14.4□□□□□ -0.1
CTSDP07339 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.4□□□□□ -0.1
CTSDP07339 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.4□□□□□ -0.1
CTSDP07339 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 AC004263.2-201ENST00000617183 678 ntBASIC14.4□□□□□ -0.1
CTSDP07339 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.4□□□□□ -0.1
CTSDP07339 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTSDP07339 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.4□□□□□ -0.1
CTSDP07339 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms