Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 KRT18P67-201ENST00000432816 1264 ntBASIC18.34■□□□□ 0.53
ZBED1O96006 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.34■□□□□ 0.53
ZBED1O96006 SIGLEC30P-201ENST00000455569 941 ntBASIC18.34■□□□□ 0.53
ZBED1O96006 AF186996.4-201ENST00000467186 377 ntBASIC18.34■□□□□ 0.53
ZBED1O96006 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.34■□□□□ 0.53
ZBED1O96006 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.34■□□□□ 0.53
ZBED1O96006 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.34■□□□□ 0.53
ZBED1O96006 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.34■□□□□ 0.53
ZBED1O96006 AC064862.7-201ENST00000604520 867 ntBASIC18.34■□□□□ 0.53
ZBED1O96006 AL022326.1-202ENST00000641533 845 ntBASIC18.34■□□□□ 0.53
ZBED1O96006 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
ZBED1O96006 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.34■□□□□ 0.53
ZBED1O96006 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZBED1O96006 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.33■□□□□ 0.53
ZBED1O96006 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZBED1O96006 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZBED1O96006 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZBED1O96006 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.33■□□□□ 0.53
ZBED1O96006 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ZBED1O96006 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
ZBED1O96006 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZBED1O96006 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ZBED1O96006 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.33■□□□□ 0.53
ZBED1O96006 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
ZBED1O96006 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.33■□□□□ 0.52
ZBED1O96006 MRPL3P1-201ENST00000400109 1033 ntBASIC18.33■□□□□ 0.52
ZBED1O96006 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZBED1O96006 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.33■□□□□ 0.52
ZBED1O96006 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ZBED1O96006 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.33■□□□□ 0.52
ZBED1O96006 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.33■□□□□ 0.52
ZBED1O96006 MTDHP4-201ENST00000600287 670 ntBASIC18.33■□□□□ 0.52
ZBED1O96006 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.33■□□□□ 0.52
ZBED1O96006 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZBED1O96006 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.33■□□□□ 0.52
ZBED1O96006 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZBED1O96006 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZBED1O96006 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ZBED1O96006 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZBED1O96006 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ZBED1O96006 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ZBED1O96006 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.32■□□□□ 0.52
ZBED1O96006 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.32■□□□□ 0.52
ZBED1O96006 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZBED1O96006 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.32■□□□□ 0.52
ZBED1O96006 FDX1P1-201ENST00000449115 551 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 AC018712.1-201ENST00000455767 687 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.32■□□□□ 0.52
ZBED1O96006 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 AL662844.1-201ENST00000546340 181 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 SLC25A6P4-201ENST00000586535 553 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 AC025062.2-201ENST00000605477 670 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.32■□□□□ 0.52
ZBED1O96006 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.32■□□□□ 0.52
ZBED1O96006 LYSMD4-203ENST00000378904 2122 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 AL645608.8-201ENST00000606034 2086 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 AC141586.5-201ENST00000624546 2050 ntBASIC18.32■□□□□ 0.52
ZBED1O96006 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
ZBED1O96006 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ZBED1O96006 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.32■□□□□ 0.52
ZBED1O96006 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZBED1O96006 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.31■□□□□ 0.52
ZBED1O96006 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZBED1O96006 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms