Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM3O75382 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM3O75382 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM3O75382 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRIM3O75382 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 AC132008.2-207ENST00000454517 770 ntBASIC16.21■□□□□ 0.19
TRIM3O75382 SAPCD2P3-201ENST00000455031 850 ntBASIC16.21■□□□□ 0.19
TRIM3O75382 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM3O75382 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM3O75382 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRIM3O75382 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
TRIM3O75382 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.21■□□□□ 0.19
TRIM3O75382 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM3O75382 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM3O75382 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM3O75382 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM3O75382 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM3O75382 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM3O75382 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM3O75382 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 AC018695.7-201ENST00000624587 2492 ntBASIC16.2■□□□□ 0.18
TRIM3O75382 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 FAM220CP-201ENST00000395253 831 ntBASIC16.2■□□□□ 0.18
TRIM3O75382 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM3O75382 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM3O75382 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM3O75382 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 AC010460.3-201ENST00000511359 1579 ntBASIC16.2■□□□□ 0.18
TRIM3O75382 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 AC108860.2-201ENST00000562760 2183 ntBASIC16.2■□□□□ 0.18
TRIM3O75382 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM3O75382 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM3O75382 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM3O75382 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM3O75382 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRIM3O75382 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM3O75382 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 AF238378.1-201ENST00000526806 358 ntBASIC16.19■□□□□ 0.18
TRIM3O75382 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM3O75382 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TRIM3O75382 AC104692.2-201ENST00000603054 253 ntBASIC16.19■□□□□ 0.18
TRIM3O75382 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM3O75382 AL031008.1-201ENST00000619963 541 ntBASIC16.19■□□□□ 0.18
TRIM3O75382 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms