Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH16O75309 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH16O75309 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH16O75309 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH16O75309 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.54■□□□□ 0.4
CDH16O75309 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH16O75309 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
CDH16O75309 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH16O75309 AL513523.2-202ENST00000427283 2040 ntBASIC17.53■□□□□ 0.4
CDH16O75309 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH16O75309 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH16O75309 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH16O75309 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDH16O75309 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH16O75309 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH16O75309 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH16O75309 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 KRT18P48-201ENST00000434763 852 ntBASIC17.52■□□□□ 0.4
CDH16O75309 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH16O75309 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH16O75309 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH16O75309 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH16O75309 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH16O75309 NAPSB-206ENST00000562112 1266 ntBASIC17.52■□□□□ 0.4
CDH16O75309 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH16O75309 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDH16O75309 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH16O75309 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.52■□□□□ 0.4
CDH16O75309 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH16O75309 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDH16O75309 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH16O75309 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH16O75309 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH16O75309 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CDH16O75309 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH16O75309 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH16O75309 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms