Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC079602.3-201ENST00000623931 403 ntBASIC16.96■□□□□ 0.31
PEX1O43933 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PEX1O43933 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PEX1O43933 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PEX1O43933 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PEX1O43933 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PEX1O43933 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PEX1O43933 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.96■□□□□ 0.31
PEX1O43933 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PEX1O43933 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.96■□□□□ 0.3
PEX1O43933 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PEX1O43933 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PEX1O43933 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.96■□□□□ 0.3
PEX1O43933 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PEX1O43933 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PEX1O43933 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PEX1O43933 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.95■□□□□ 0.3
PEX1O43933 LINC02199-201ENST00000506655 2702 ntBASIC16.95■□□□□ 0.3
PEX1O43933 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PEX1O43933 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.95■□□□□ 0.3
PEX1O43933 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.95■□□□□ 0.3
PEX1O43933 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.95■□□□□ 0.3
PEX1O43933 KRT18P56-201ENST00000507275 550 ntBASIC16.95■□□□□ 0.3
PEX1O43933 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.95■□□□□ 0.3
PEX1O43933 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
PEX1O43933 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.95■□□□□ 0.3
PEX1O43933 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.95■□□□□ 0.3
PEX1O43933 HYMAI-201ENST00000635591 3347 ntBASIC16.95■□□□□ 0.3
PEX1O43933 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PEX1O43933 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.95■□□□□ 0.3
PEX1O43933 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PEX1O43933 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PEX1O43933 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.95■□□□□ 0.3
PEX1O43933 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
PEX1O43933 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PEX1O43933 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PEX1O43933 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PEX1O43933 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.94■□□□□ 0.3
PEX1O43933 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.94■□□□□ 0.3
PEX1O43933 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.94■□□□□ 0.3
PEX1O43933 AL136038.4-201ENST00000603606 1261 ntBASIC16.94■□□□□ 0.3
PEX1O43933 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
PEX1O43933 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.94■□□□□ 0.3
PEX1O43933 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.94■□□□□ 0.3
PEX1O43933 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.94■□□□□ 0.3
PEX1O43933 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.94■□□□□ 0.3
PEX1O43933 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PEX1O43933 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 PCDHB17P-201ENST00000539533 2393 ntBASIC16.94■□□□□ 0.3
PEX1O43933 AL391807.1-203ENST00000604392 2365 ntBASIC16.94■□□□□ 0.3
PEX1O43933 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PEX1O43933 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
PEX1O43933 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms