Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC28A2O43868 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SLC28A2O43868 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC28A2O43868 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC28A2O43868 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC28A2O43868 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC28A2O43868 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC28A2O43868 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SLC28A2O43868 AC034105.1-201ENST00000563488 319 ntBASIC16.74■□□□□ 0.27
SLC28A2O43868 MTDHP3-201ENST00000594186 672 ntBASIC16.74■□□□□ 0.27
SLC28A2O43868 AC114341.1-201ENST00000618070 349 ntBASIC16.74■□□□□ 0.27
SLC28A2O43868 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC28A2O43868 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SLC28A2O43868 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SLC28A2O43868 AL355312.1-201ENST00000407115 2176 ntBASIC16.74■□□□□ 0.27
SLC28A2O43868 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SLC28A2O43868 FGFR3P6-201ENST00000457012 610 ntBASIC16.73■□□□□ 0.27
SLC28A2O43868 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.73■□□□□ 0.27
SLC28A2O43868 AC092910.1-201ENST00000482027 1129 ntBASIC16.73■□□□□ 0.27
SLC28A2O43868 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC28A2O43868 RNA5SP416-201ENST00000516838 111 ntBASIC16.73■□□□□ 0.27
SLC28A2O43868 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.73■□□□□ 0.27
SLC28A2O43868 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC28A2O43868 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 Z83851.2-201ENST00000609564 659 ntBASIC16.73■□□□□ 0.27
SLC28A2O43868 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SLC28A2O43868 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC28A2O43868 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SLC28A2O43868 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A2O43868 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC28A2O43868 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC28A2O43868 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC28A2O43868 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC28A2O43868 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC28A2O43868 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms