Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KDELR3O43731 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.54■□□□□ 0.4
KDELR3O43731 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.54■□□□□ 0.4
KDELR3O43731 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.54■□□□□ 0.4
KDELR3O43731 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.54■□□□□ 0.4
KDELR3O43731 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.54■□□□□ 0.4
KDELR3O43731 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 AC008667.4-201ENST00000607370 168 ntBASIC17.54■□□□□ 0.4
KDELR3O43731 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.54■□□□□ 0.4
KDELR3O43731 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDELR3O43731 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KDELR3O43731 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.53■□□□□ 0.4
KDELR3O43731 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KDELR3O43731 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.53■□□□□ 0.4
KDELR3O43731 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.53■□□□□ 0.4
KDELR3O43731 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 TERC-201ENST00000602385 541 ntBASIC17.53■□□□□ 0.4
KDELR3O43731 AC120114.3-201ENST00000611923 658 ntBASIC17.53■□□□□ 0.4
KDELR3O43731 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
KDELR3O43731 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KDELR3O43731 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KDELR3O43731 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.53■□□□□ 0.4
KDELR3O43731 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.53■□□□□ 0.4
KDELR3O43731 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDELR3O43731 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.52■□□□□ 0.4
KDELR3O43731 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.52■□□□□ 0.4
KDELR3O43731 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.52■□□□□ 0.4
KDELR3O43731 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.52■□□□□ 0.4
KDELR3O43731 RNA5SP415-201ENST00000517246 115 ntBASIC17.52■□□□□ 0.4
KDELR3O43731 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.52■□□□□ 0.4
KDELR3O43731 IGHV3-65-201ENST00000523210 341 ntBASIC17.52■□□□□ 0.4
KDELR3O43731 UNC93B6-202ENST00000528242 690 ntBASIC17.52■□□□□ 0.4
KDELR3O43731 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.52■□□□□ 0.4
KDELR3O43731 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.52■□□□□ 0.4
KDELR3O43731 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDELR3O43731 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
KDELR3O43731 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KDELR3O43731 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
KDELR3O43731 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
KDELR3O43731 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
KDELR3O43731 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.52■□□□□ 0.39
KDELR3O43731 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.52■□□□□ 0.39
KDELR3O43731 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KDELR3O43731 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KDELR3O43731 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.52■□□□□ 0.39
KDELR3O43731 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.52■□□□□ 0.39
KDELR3O43731 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
KDELR3O43731 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KDELR3O43731 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.51■□□□□ 0.39
KDELR3O43731 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms