Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.51■□□□□ 0.23
CLOCKO15516 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CLOCKO15516 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.51■□□□□ 0.23
CLOCKO15516 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.51■□□□□ 0.23
CLOCKO15516 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.51■□□□□ 0.23
CLOCKO15516 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.51■□□□□ 0.23
CLOCKO15516 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.51■□□□□ 0.23
CLOCKO15516 COX11P1-201ENST00000489116 835 ntBASIC16.51■□□□□ 0.23
CLOCKO15516 AL512604.3-201ENST00000569583 964 ntBASIC16.51■□□□□ 0.23
CLOCKO15516 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.51■□□□□ 0.23
CLOCKO15516 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.51■□□□□ 0.23
CLOCKO15516 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.51■□□□□ 0.23
CLOCKO15516 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.51■□□□□ 0.23
CLOCKO15516 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CLOCKO15516 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.51■□□□□ 0.23
CLOCKO15516 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLOCKO15516 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLOCKO15516 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.5■□□□□ 0.23
CLOCKO15516 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 AC116353.5-201ENST00000638148 1699 ntBASIC16.5■□□□□ 0.23
CLOCKO15516 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.5■□□□□ 0.23
CLOCKO15516 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLOCKO15516 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 AC022616.7-201ENST00000525383 220 ntBASIC16.5■□□□□ 0.23
CLOCKO15516 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.5■□□□□ 0.23
CLOCKO15516 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 AL138966.2-201ENST00000621997 464 ntBASIC16.5■□□□□ 0.23
CLOCKO15516 AC141257.4-201ENST00000634557 245 ntBASIC16.5■□□□□ 0.23
CLOCKO15516 AC136944.6-201ENST00000634818 245 ntBASIC16.5■□□□□ 0.23
CLOCKO15516 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLOCKO15516 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CLOCKO15516 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLOCKO15516 AC103702.1-201ENST00000548801 2630 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLOCKO15516 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLOCKO15516 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.49■□□□□ 0.23
CLOCKO15516 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.49■□□□□ 0.23
CLOCKO15516 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 PCDHB17P-201ENST00000539533 2393 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.49■□□□□ 0.23
CLOCKO15516 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 RNF152P1-201ENST00000397754 604 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLOCKO15516 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLOCKO15516 YBX1P2-201ENST00000489612 999 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.49■□□□□ 0.23
CLOCKO15516 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.49■□□□□ 0.23
CLOCKO15516 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.49■□□□□ 0.23
CLOCKO15516 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLOCKO15516 AC008687.5-201ENST00000593746 558 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 AC140113.3-201ENST00000605663 199 ntBASIC16.49■□□□□ 0.23
CLOCKO15516 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms