Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MID1O15344 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MID1O15344 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MID1O15344 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MID1O15344 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MID1O15344 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
MID1O15344 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.33■□□□□ 0.36
MID1O15344 AC096734.2-201ENST00000562054 433 ntBASIC17.33■□□□□ 0.36
MID1O15344 AP001160.2-201ENST00000596071 487 ntBASIC17.33■□□□□ 0.36
MID1O15344 AC004877.2-201ENST00000623941 599 ntBASIC17.33■□□□□ 0.36
MID1O15344 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
MID1O15344 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MID1O15344 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.33■□□□□ 0.36
MID1O15344 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MID1O15344 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MID1O15344 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
MID1O15344 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
MID1O15344 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MID1O15344 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MID1O15344 BCAR1-209ENST00000546196 1340 ntBASIC17.32■□□□□ 0.36
MID1O15344 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MID1O15344 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 AC211486.1-202ENST00000416371 468 ntBASIC17.32■□□□□ 0.36
MID1O15344 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.32■□□□□ 0.36
MID1O15344 AC211476.1-201ENST00000503899 468 ntBASIC17.32■□□□□ 0.36
MID1O15344 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.32■□□□□ 0.36
MID1O15344 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.32■□□□□ 0.36
MID1O15344 AC005829.1-201ENST00000570002 483 ntBASIC17.32■□□□□ 0.36
MID1O15344 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
MID1O15344 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.32■□□□□ 0.36
MID1O15344 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.32■□□□□ 0.36
MID1O15344 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.32■□□□□ 0.36
MID1O15344 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 AL355312.1-201ENST00000407115 2176 ntBASIC17.32■□□□□ 0.36
MID1O15344 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 LYSMD4-203ENST00000378904 2122 ntBASIC17.32■□□□□ 0.36
MID1O15344 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MID1O15344 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.31■□□□□ 0.36
MID1O15344 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.31■□□□□ 0.36
MID1O15344 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
MID1O15344 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.31■□□□□ 0.36
MID1O15344 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.31■□□□□ 0.36
MID1O15344 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
MID1O15344 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 AC079781.4-201ENST00000641908 219 ntBASIC17.31■□□□□ 0.36
MID1O15344 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
MID1O15344 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MID1O15344 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
MID1O15344 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MID1O15344 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MID1O15344 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MID1O15344 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MID1O15344 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MID1O15344 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms