Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GOLGA6L4A6NEF3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GOLGA6L4A6NEF3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GOLGA6L4A6NEF3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 HLA-F-220ENST00000434407 884 ntBASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 AP003733.1-201ENST00000491725 852 ntBASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 AL353692.3-201ENST00000407031 1396 ntBASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 AC005915.1-201ENST00000624912 2018 ntBASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 AC063926.3-201ENST00000624734 5658 ntBASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GOLGA6L4A6NEF3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 AC105020.1-201ENST00000435356 2205 ntBASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GOLGA6L4A6NEF3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 IGHGP-201ENST00000390555 1178 ntBASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 COX11P1-201ENST00000489116 835 ntBASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GOLGA6L4A6NEF3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GOLGA6L4A6NEF3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms