Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TBC1D3BA6NDS4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 FAM58CP-201ENST00000435741 640 ntBASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 METTL21AP1-201ENST00000438852 635 ntBASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 AL355385.1-201ENST00000606123 409 ntBASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3BA6NDS4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 AL031432.2-201ENST00000566714 459 ntBASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 AL928711.1-201ENST00000570165 459 ntBASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3BA6NDS4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 FAM185BP-201ENST00000443595 716 ntBASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 ACTG1P14-201ENST00000446382 1122 ntBASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 AL513480.1-201ENST00000451731 511 ntBASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3BA6NDS4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms