Protein–RNA interactions for Protein: A2A2Y4

FRMD3, FERM domain-containing protein 3, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3A2A2Y4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 EGFEM1P-202ENST00000431685 1563 ntBASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FRMD3A2A2Y4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 UNC93B7-201ENST00000509439 705 ntBASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FRMD3A2A2Y4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 SAPCD2P3-201ENST00000455031 850 ntBASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 NKAPP1-205ENST00000585790 367 ntBASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 MTDHP3-201ENST00000594186 672 ntBASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 IFNL4P1-201ENST00000607083 540 ntBASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
FRMD3A2A2Y4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FRMD3A2A2Y4 AF238378.1-201ENST00000526806 358 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms