Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH2Q9Y6C5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 TSSK5P-201ENST00000423978 907 ntBASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 SPTLC1P1-201ENST00000447199 261 ntBASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 MIR4453-201ENST00000584019 89 ntBASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 AL590560.3-201ENST00000623350 461 ntBASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH2Q9Y6C5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 HMGA1P7-201ENST00000406908 502 ntBASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 AC027369.6-201ENST00000525520 931 ntBASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCH2Q9Y6C5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PTCH2Q9Y6C5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
PTCH2Q9Y6C5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.39■□□□□ 0.7
PTCH2Q9Y6C5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 AC073592.8-201ENST00000624126 511 ntBASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 AC022144.1-201ENST00000602255 1580 ntBASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCH2Q9Y6C5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms