Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 AC016027.1-202ENST00000607927 1699 ntBASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 AC098818.2-201ENST00000564925 2320 ntBASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPBQ9Y5S2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 AC142381.1-201ENST00000426099 345 ntBASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 TMPRSS11CP-201ENST00000453277 683 ntBASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 AC025048.6-201ENST00000634326 1161 ntBASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPBQ9Y5S2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 SPDYE12P-201ENST00000618416 771 ntBASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CDC42BPBQ9Y5S2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 EGFEM1P-202ENST00000431685 1563 ntBASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 CALY-202ENST00000368555 783 ntTSL 2 BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CDC42BPBQ9Y5S2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 COX5BP8-201ENST00000416911 349 ntBASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPBQ9Y5S2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 AC241585.1-201ENST00000433527 519 ntBASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.83■■□□□ 1.72
CDC42BPBQ9Y5S2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC25.83■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms