Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAPPC1Q9Y5R8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 AC022898.2-201ENST00000616822 1312 ntBASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 LSM12P1-201ENST00000411836 588 ntBASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 PRSS44-201ENST00000515154 1146 ntBASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 AC116407.2-201ENST00000613639 860 ntBASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAPPC1Q9Y5R8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 AC006058.4-201ENST00000624016 1670 ntBASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 AC034236.2-201ENST00000606662 1610 ntBASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 MIR564-202ENST00000385049 94 ntBASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAPPC1Q9Y5R8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms