Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPS28Q9Y2Q9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 MYCLP1-201ENST00000372451 1075 ntBASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 COX5BP2-201ENST00000392354 334 ntBASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 FLJ38576-201ENST00000623820 2459 ntBASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPS28Q9Y2Q9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 PCDHB19P-201ENST00000570871 2371 ntBASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 MIR662-201ENST00000384847 95 ntBASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 SLC25A1P3-201ENST00000395415 828 ntBASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 AC087499.1-201ENST00000418141 1075 ntBASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 AL359075.1-203ENST00000462729 1002 ntBASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 AC011558.1-201ENST00000623459 338 ntBASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPS28Q9Y2Q9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
MRPS28Q9Y2Q9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MRPS28Q9Y2Q9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
MRPS28Q9Y2Q9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
MRPS28Q9Y2Q9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MRPS28Q9Y2Q9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.96□□□□□ -0.02
MRPS28Q9Y2Q9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MRPS28Q9Y2Q9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPS28Q9Y2Q9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms