Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 PCDHA14-201ENST00000506751 2298 ntBASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 CA15P1-201ENST00000481698 905 ntBASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 AC112497.1-201ENST00000624824 639 ntBASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 KRT8P7-201ENST00000533003 1432 ntBASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 AC097376.2-205ENST00000610159 5334 ntBASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPH3ALQ9UNE2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 PCDH8P1-201ENST00000428983 2773 ntBASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CR769767.2-201ENST00000622735 460 ntBASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPH3ALQ9UNE2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPH3ALQ9UNE2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms