Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 MIR1233-2-201ENST00000408138 82 ntBASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 MIR1233-1-201ENST00000408722 82 ntBASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC096633.1-201ENST00000422446 749 ntBASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC105339.3-201ENST00000560043 636 ntBASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 BX842568.4-201ENST00000421222 227 ntBASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 RNA5SP415-201ENST00000517246 115 ntBASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 AC145285.3-201ENST00000564603 959 ntBASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 AC027601.4-201ENST00000611259 610 ntBASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 AC107918.4-202ENST00000641623 219 ntBASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 FZD10-202ENST00000539839 3282 ntBASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA1Q9UND3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 KRT8P47-201ENST00000604727 1398 ntBASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 MED15P5-201ENST00000423150 992 ntBASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 Z83851.2-201ENST00000609564 659 ntBASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA1Q9UND3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 AP002414.3-201ENST00000589352 1468 ntBASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NPIPA1Q9UND3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 LINC00896-202ENST00000609602 2128 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AC079776.2-201ENST00000641154 1609 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms