Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGC3Q9UN70 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGC3Q9UN70 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGC3Q9UN70 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 AC060834.1-201ENST00000443027 2032 ntBASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 AC064862.7-201ENST00000604520 867 ntBASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 AC244517.3-201ENST00000616254 1235 ntBASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 AL589935.2-201ENST00000616471 1231 ntBASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC3Q9UN70 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC3Q9UN70 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGC3Q9UN70 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC3Q9UN70 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.51
PCDHGC3Q9UN70 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCDHGC3Q9UN70 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC3Q9UN70 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 MTDHP4-201ENST00000600287 670 ntBASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC3Q9UN70 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 AL590787.1-201ENST00000568856 1315 ntBASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 FRMD8P1-201ENST00000440433 1524 ntBASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 AC021087.4-201ENST00000563761 564 ntBASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 AC025062.2-201ENST00000605477 670 ntBASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC3Q9UN70 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 AC012313.1-201ENST00000593393 3059 ntBASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms