Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 MCCD1P2-201ENST00000423228 335 ntBASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 AC055717.3-201ENST00000622967 595 ntBASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 FZD10-202ENST00000539839 3282 ntBASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 AC096734.2-201ENST00000562054 433 ntBASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 AC092865.6-201ENST00000642101 219 ntBASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.94■□□□□ 0.94
DENND2AQ9ULE3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 PAWRP1-201ENST00000451083 565 ntBASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND2AQ9ULE3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 AC010507.1-201ENST00000633895 436 ntBASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms