Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 FAM8A6P-201ENST00000407496 1135 ntBASIC15.32■□□□□ 0.04
DUX4Q9UBX2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 AC034232.1-201ENST00000506026 1064 ntBASIC15.32■□□□□ 0.04
DUX4Q9UBX2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 HYMAI.1-201ENST00000620949 238 ntBASIC15.32■□□□□ 0.04
DUX4Q9UBX2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX4Q9UBX2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 AC068418.2-201ENST00000577309 3703 ntBASIC15.31■□□□□ 0.04
DUX4Q9UBX2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 MIR149-201ENST00000384879 89 ntBASIC15.31■□□□□ 0.04
DUX4Q9UBX2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 HOMER2P1-201ENST00000455653 964 ntBASIC15.31■□□□□ 0.04
DUX4Q9UBX2 KRT18P35-201ENST00000510488 1269 ntBASIC15.31■□□□□ 0.04
DUX4Q9UBX2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 VENTXP5-201ENST00000523979 775 ntBASIC15.31■□□□□ 0.04
DUX4Q9UBX2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
DUX4Q9UBX2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
DUX4Q9UBX2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms