Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 AC108860.2-201ENST00000562760 2183 ntBASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
PPARGC1AQ9UBK2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 AC084018.2-201ENST00000613093 2607 ntBASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 SAPCD2P3-201ENST00000455031 850 ntBASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 AP001269.4-201ENST00000609611 512 ntBASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPARGC1AQ9UBK2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 AKR1C7P-201ENST00000305623 895 ntBASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 STK25P1-201ENST00000585406 838 ntBASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 AC124067.4-201ENST00000519691 2379 ntBASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPARGC1AQ9UBK2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PPARGC1AQ9UBK2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.08■□□□□ 0.49
PPARGC1AQ9UBK2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PPARGC1AQ9UBK2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PPARGC1AQ9UBK2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.08■□□□□ 0.49
PPARGC1AQ9UBK2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.08■□□□□ 0.49
PPARGC1AQ9UBK2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms