Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC132008.2-207ENST00000454517 770 ntBASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC073648.2-201ENST00000510116 352 ntBASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AC116407.2-201ENST00000613639 860 ntBASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 AL355877.3-201ENST00000622820 899 ntBASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKIPSDQ9NZQ3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKIPSDQ9NZQ3 AD000864.1-201ENST00000624076 2295 ntBASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 AL031284.1-201ENST00000419297 478 ntBASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 TP73-AS1-207ENST00000624167 988 ntBASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKIPSDQ9NZQ3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 LINC00304-203ENST00000565008 1864 ntBASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 AC006538.3-201ENST00000612495 578 ntBASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 HLA-J-201ENST00000462773 1622 ntBASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms