Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 AL603756.1-201ENST00000606511 2163 ntBASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 FER1L4-210ENST00000615531 5998 ntBASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 AC092597.1-201ENST00000487352 616 ntBASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 AC124947.2-201ENST00000547118 1133 ntBASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE2Q9NRR3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 AC011558.1-201ENST00000623459 338 ntBASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms