Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PRYP5-201ENST00000451909 266 ntBASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 SIGLEC30P-201ENST00000455569 941 ntBASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 AL662844.1-201ENST00000546340 181 ntBASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 AL022326.1-202ENST00000641533 845 ntBASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 KRT18P67-201ENST00000432816 1264 ntBASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 BX005266.1-201ENST00000473402 457 ntBASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 RNPS1P1-201ENST00000507437 918 ntBASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 AC021087.4-201ENST00000563761 564 ntBASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 AL645608.8-201ENST00000606034 2086 ntBASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRDM9Q9NQV7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRDM9Q9NQV7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 MTDHP4-201ENST00000600287 670 ntBASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PP12613-201ENST00000424958 2230 ntBASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 OR6D1P-202ENST00000641007 5290 ntBASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 AC141586.5-201ENST00000624546 2050 ntBASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.39■□□□□ 0.21
PRDM9Q9NQV7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms