Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 AL122018.1-201ENST00000446607 2310 ntBASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 RBM17P1-201ENST00000453646 1190 ntBASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 AC099063.4-201ENST00000641099 1602 ntBASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf4Q9NQ89 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 AL355312.1-201ENST00000407115 2176 ntBASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 C2orf69P3-201ENST00000565542 1120 ntBASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 AC022898.2-201ENST00000616822 1312 ntBASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf4Q9NQ89 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C12orf4Q9NQ89 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms