Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 AC107956.1-201ENST00000494359 873 ntBASIC15.83■□□□□ 0.12
HMG20AQ9NP66 AC116562.2-201ENST00000507042 360 ntBASIC15.83■□□□□ 0.12
HMG20AQ9NP66 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 AP001412.1-201ENST00000608405 714 ntBASIC15.83■□□□□ 0.12
HMG20AQ9NP66 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 RCC2P3-201ENST00000418112 1537 ntBASIC15.83■□□□□ 0.12
HMG20AQ9NP66 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.83■□□□□ 0.12
HMG20AQ9NP66 AC079328.2-201ENST00000561241 3354 ntBASIC15.83■□□□□ 0.12
HMG20AQ9NP66 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 AP000593.1-201ENST00000393668 712 ntBASIC15.82■□□□□ 0.12
HMG20AQ9NP66 AC012618.2-201ENST00000428058 849 ntBASIC15.82■□□□□ 0.12
HMG20AQ9NP66 NUDT16P1-203ENST00000513809 620 ntBASIC15.82■□□□□ 0.12
HMG20AQ9NP66 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 DGCR10-201ENST00000609839 495 ntBASIC15.82■□□□□ 0.12
HMG20AQ9NP66 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 AC096733.2-201ENST00000609937 1394 ntBASIC15.82■□□□□ 0.12
HMG20AQ9NP66 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMG20AQ9NP66 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 ABHD17AP1-201ENST00000358206 933 ntBASIC15.81■□□□□ 0.12
HMG20AQ9NP66 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms