Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 HMGN1P19-201ENST00000436976 333 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 VN2R19P-201ENST00000442399 1052 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AP006288.1-201ENST00000446065 395 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 IGHV3-65-201ENST00000523210 341 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC109462.3-201ENST00000573934 613 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AL355385.1-201ENST00000606123 409 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC008667.4-201ENST00000607370 168 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC092865.6-201ENST00000642101 219 ntBASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF3Q9HD45 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 AC093677.2-201ENST00000600169 1863 ntBASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF3Q9HD45 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 AC138028.4-201ENST00000564984 1845 ntBASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF3Q9HD45 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF3Q9HD45 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF3Q9HD45 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.33■□□□□ 0.36
TM9SF3Q9HD45 PRSS29P-201ENST00000440800 595 ntBASIC17.33■□□□□ 0.36
TM9SF3Q9HD45 HCG4B-203ENST00000450128 991 ntBASIC17.33■□□□□ 0.36
TM9SF3Q9HD45 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms