Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 AC132008.2-207ENST00000454517 770 ntBASIC18.29■□□□□ 0.52
CD248Q9HCU0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD248Q9HCU0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CD248Q9HCU0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 LINC01126-201ENST00000623515 1646 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 KRT18P67-201ENST00000432816 1264 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 FAM197Y8-203ENST00000450145 560 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 AC018712.1-201ENST00000455767 687 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 AL138831.2-201ENST00000606564 490 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 AC120114.3-201ENST00000611923 658 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 AL773604.1-201ENST00000617417 272 ntBASIC18.28■□□□□ 0.52
CD248Q9HCU0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CD248Q9HCU0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD248Q9HCU0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 AL590627.1-203ENST00000421194 1026 ntBASIC18.27■□□□□ 0.52
CD248Q9HCU0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 AP001005.1-201ENST00000571755 1248 ntBASIC18.27■□□□□ 0.52
CD248Q9HCU0 AC064862.7-201ENST00000604520 867 ntBASIC18.27■□□□□ 0.52
CD248Q9HCU0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms