Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCSER1Q9C0I3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCSER1Q9C0I3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCSER1Q9C0I3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 AC091304.2-201ENST00000564639 760 ntBASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 PRELID1P1-202ENST00000567272 903 ntBASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 AL355877.3-201ENST00000622820 899 ntBASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 GPR89P-201ENST00000407924 1495 ntBASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 AC009053.2-201ENST00000563701 2365 ntBASIC19.39■□□□□ 0.69
CCSER1Q9C0I3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 FRMD8P1-201ENST00000440433 1524 ntBASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 KRT126P-201ENST00000549467 1181 ntBASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 AL139288.1-201ENST00000623748 933 ntBASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCSER1Q9C0I3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 LINC00982-205ENST00000420957 435 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 BX005266.1-201ENST00000473402 457 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 NKAPP1-205ENST00000585790 367 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 MTDHP3-201ENST00000594186 672 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 REXO1L6P-202ENST00000619970 1078 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 AL022326.1-202ENST00000641533 845 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 AL356309.3-201ENST00000624132 1934 ntBASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCSER1Q9C0I3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms