Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC090142.2-201ENST00000483263 416 ntBASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC104390.1-201ENST00000555663 520 ntBASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 WWOX-216ENST00000569818 525 ntBASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 AC132938.6-201ENST00000623828 1655 ntBASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 MTND2P7-201ENST00000521337 640 ntBASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP4Q9BWG4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SSBP4Q9BWG4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SSBP4Q9BWG4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
SSBP4Q9BWG4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SSBP4Q9BWG4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.15□□□□□ -0.31
SSBP4Q9BWG4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 NORAD-201ENST00000565493 5339 ntBASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP4Q9BWG4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms