Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 PP12613-201ENST00000424958 2230 ntBASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 AC097637.2-201ENST00000624096 1997 ntBASIC17.08■□□□□ 0.32
CCM2Q9BSQ5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 RPS2P28-201ENST00000314255 741 ntBASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 KRT18P67-201ENST00000432816 1264 ntBASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 RNPS1P1-201ENST00000507437 918 ntBASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 AC021087.4-201ENST00000563761 564 ntBASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 TP73-AS1-207ENST00000624167 988 ntBASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2Q9BSQ5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 PKD1P1-201ENST00000458669 6805 ntBASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 AC026396.1-201ENST00000419388 421 ntBASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 AC141586.5-201ENST00000624546 2050 ntBASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCM2Q9BSQ5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 ACTG1P4-201ENST00000425123 1122 ntBASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms