Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 LYSMD4-203ENST00000378904 2122 ntBASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMSS1Q9BQ75 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 TSPY12P-201ENST00000421279 868 ntBASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 AC009154.2-201ENST00000621177 724 ntBASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.87□□□□□ -0.03
CMSS1Q9BQ75 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms