Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NPAS1Q99742 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 IGHV3-52-201ENST00000519770 353 ntBASIC15.83■□□□□ 0.12
NPAS1Q99742 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
NPAS1Q99742 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.83■□□□□ 0.12
NPAS1Q99742 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NPAS1Q99742 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
NPAS1Q99742 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
NPAS1Q99742 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPAS1Q99742 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.82■□□□□ 0.12
NPAS1Q99742 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS1Q99742 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS1Q99742 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 AC018695.7-201ENST00000624587 2492 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS1Q99742 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS1Q99742 KLF4P1-201ENST00000412782 1185 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 SPDYE21P-201ENST00000413323 827 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.82■□□□□ 0.12
NPAS1Q99742 STK19B-204ENST00000512515 211 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 NKAPP1-205ENST00000585790 367 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 AC104692.2-201ENST00000603054 253 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS1Q99742 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPAS1Q99742 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPAS1Q99742 AC079776.2-201ENST00000641154 1609 ntBASIC15.82■□□□□ 0.12
NPAS1Q99742 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPAS1Q99742 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS1Q99742 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
NPAS1Q99742 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NPAS1Q99742 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS1Q99742 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS1Q99742 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS1Q99742 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS1Q99742 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS1Q99742 AC108860.2-201ENST00000562760 2183 ntBASIC15.81■□□□□ 0.12
NPAS1Q99742 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.81■□□□□ 0.12
NPAS1Q99742 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS1Q99742 LINC01711-201ENST00000598340 967 ntBASIC15.81■□□□□ 0.12
NPAS1Q99742 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 AC009336.1-201ENST00000608941 1553 ntBASIC15.81■□□□□ 0.12
NPAS1Q99742 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS1Q99742 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS1Q99742 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms