Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CGREF1Q99674 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.53■□□□□ 0.24
CGREF1Q99674 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CGREF1Q99674 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGREF1Q99674 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CGREF1Q99674 DOC2GP-204ENST00000639052 2548 ntBASIC16.53■□□□□ 0.24
CGREF1Q99674 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CGREF1Q99674 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CGREF1Q99674 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CGREF1Q99674 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CGREF1Q99674 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
CGREF1Q99674 RNF216P1-203ENST00000404404 2427 ntBASIC16.53■□□□□ 0.24
CGREF1Q99674 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CGREF1Q99674 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CGREF1Q99674 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CGREF1Q99674 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CGREF1Q99674 PCDH8P1-201ENST00000428983 2773 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 AC097374.2-201ENST00000618617 1306 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 FAM8A6P-201ENST00000407496 1135 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 SPDYE15P-201ENST00000424157 909 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.52■□□□□ 0.24
CGREF1Q99674 AP003733.1-201ENST00000491725 852 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 AL441883.1-201ENST00000566170 1045 ntBASIC16.52■□□□□ 0.24
CGREF1Q99674 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.52■□□□□ 0.24
CGREF1Q99674 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.52■□□□□ 0.24
CGREF1Q99674 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CGREF1Q99674 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CGREF1Q99674 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CGREF1Q99674 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.52■□□□□ 0.23
CGREF1Q99674 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.52■□□□□ 0.23
CGREF1Q99674 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.52■□□□□ 0.23
CGREF1Q99674 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CGREF1Q99674 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.52■□□□□ 0.23
CGREF1Q99674 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CGREF1Q99674 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 AC010460.3-201ENST00000511359 1579 ntBASIC16.51■□□□□ 0.23
CGREF1Q99674 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.51■□□□□ 0.23
CGREF1Q99674 C8orf49-201ENST00000525043 1968 ntBASIC16.51■□□□□ 0.23
CGREF1Q99674 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
CGREF1Q99674 AC078925.2-201ENST00000624013 1973 ntBASIC16.51■□□□□ 0.23
CGREF1Q99674 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CGREF1Q99674 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CGREF1Q99674 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.51■□□□□ 0.23
CGREF1Q99674 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.51■□□□□ 0.23
CGREF1Q99674 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.51■□□□□ 0.23
CGREF1Q99674 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.51■□□□□ 0.23
CGREF1Q99674 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.51■□□□□ 0.23
CGREF1Q99674 AL031432.5-201ENST00000641059 760 ntBASIC16.51■□□□□ 0.23
CGREF1Q99674 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CGREF1Q99674 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CGREF1Q99674 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.51■□□□□ 0.23
CGREF1Q99674 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.51■□□□□ 0.23
CGREF1Q99674 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CGREF1Q99674 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CGREF1Q99674 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.51■□□□□ 0.23
CGREF1Q99674 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGREF1Q99674 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CGREF1Q99674 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms