Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 AC105020.1-201ENST00000435356 2205 ntBASIC12.7□□□□□ -0.38
MUC4Q99102 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 MTCL1P1-201ENST00000446207 792 ntBASIC12.7□□□□□ -0.38
MUC4Q99102 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.7□□□□□ -0.38
MUC4Q99102 AL390719.2-201ENST00000606993 987 ntBASIC12.7□□□□□ -0.38
MUC4Q99102 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
MUC4Q99102 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 Z83836.1-201ENST00000624605 1642 ntBASIC12.69□□□□□ -0.38
MUC4Q99102 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MUC4Q99102 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.69□□□□□ -0.38
MUC4Q99102 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.69□□□□□ -0.38
MUC4Q99102 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.69□□□□□ -0.38
MUC4Q99102 AL136038.3-201ENST00000561909 1096 ntBASIC12.69□□□□□ -0.38
MUC4Q99102 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.69□□□□□ -0.38
MUC4Q99102 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.69□□□□□ -0.38
MUC4Q99102 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MUC4Q99102 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MUC4Q99102 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
MUC4Q99102 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 PCDH8P1-201ENST00000428983 2773 ntBASIC12.69□□□□□ -0.38
MUC4Q99102 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MUC4Q99102 TSPY22P-201ENST00000427496 604 ntBASIC12.69□□□□□ -0.38
MUC4Q99102 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.69□□□□□ -0.38
MUC4Q99102 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
MUC4Q99102 PCDHA14-201ENST00000506751 2298 ntBASIC12.68□□□□□ -0.38
MUC4Q99102 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.68□□□□□ -0.38
MUC4Q99102 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.68□□□□□ -0.38
MUC4Q99102 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MUC4Q99102 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.68□□□□□ -0.38
MUC4Q99102 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms