Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 KRT8P10-201ENST00000450021 1447 ntBASIC16.48■□□□□ 0.23
BBS4Q96RK4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 AC011467.2-201ENST00000598425 242 ntBASIC16.48■□□□□ 0.23
BBS4Q96RK4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 AC093458.2-201ENST00000623150 629 ntBASIC16.48■□□□□ 0.23
BBS4Q96RK4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 AL049757.1-201ENST00000616842 1596 ntBASIC16.47■□□□□ 0.23
BBS4Q96RK4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 AC092329.2-201ENST00000598402 547 ntBASIC16.47■□□□□ 0.23
BBS4Q96RK4 AC092119.3-201ENST00000612618 583 ntBASIC16.47■□□□□ 0.23
BBS4Q96RK4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.47■□□□□ 0.23
BBS4Q96RK4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BBS4Q96RK4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BBS4Q96RK4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 MIR3180-1-201ENST00000580374 94 ntBASIC16.46■□□□□ 0.23
BBS4Q96RK4 MIR3180-3-201ENST00000584616 94 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms