Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 AL080243.2-201ENST00000418783 582 ntBASIC18.65■□□□□ 0.58
ALPK3Q96L96 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 AC005412.3-201ENST00000580309 715 ntBASIC18.65■□□□□ 0.58
ALPK3Q96L96 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 AL020996.1-203ENST00000536896 2307 ntBASIC18.65■□□□□ 0.58
ALPK3Q96L96 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 MIR346-201ENST00000362234 95 ntBASIC18.64■□□□□ 0.58
ALPK3Q96L96 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.64■□□□□ 0.58
ALPK3Q96L96 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.64■□□□□ 0.58
ALPK3Q96L96 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.64■□□□□ 0.58
ALPK3Q96L96 AC009407.1-201ENST00000568958 598 ntBASIC18.64■□□□□ 0.58
ALPK3Q96L96 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ALPK3Q96L96 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 AC046185.3-201ENST00000623228 1824 ntBASIC18.64■□□□□ 0.57
ALPK3Q96L96 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 KRT223P-202ENST00000449164 1292 ntBASIC18.64■□□□□ 0.57
ALPK3Q96L96 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
ALPK3Q96L96 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALPK3Q96L96 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 AC012569.1-201ENST00000591191 1524 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 REXO1L6P-201ENST00000603433 1515 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 RNF165-205ENST00000588679 2904 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 AC005332.7-201ENST00000614046 2005 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 CHCHD2P3-201ENST00000603038 451 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 AC116562.4-201ENST00000641316 2276 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 SLC7A15P-201ENST00000424028 1363 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 AL391825.1-201ENST00000457671 1364 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 REXO1L11P-201ENST00000620964 1927 ntBASIC18.63■□□□□ 0.57
ALPK3Q96L96 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALPK3Q96L96 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ALPK3Q96L96 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AC098614.1-201ENST00000368528 745 ntBASIC18.62■□□□□ 0.57
ALPK3Q96L96 TTTY23B-201ENST00000442790 549 ntBASIC18.62■□□□□ 0.57
ALPK3Q96L96 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms