Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 CNN2P11-201ENST00000429351 262 ntBASIC17.36■□□□□ 0.37
SIPA1Q96FS4 METTL21AP1-201ENST00000438852 635 ntBASIC17.36■□□□□ 0.37
SIPA1Q96FS4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 AC074386.1-202ENST00000463561 864 ntBASIC17.36■□□□□ 0.37
SIPA1Q96FS4 CXCL1P1-201ENST00000502804 216 ntBASIC17.36■□□□□ 0.37
SIPA1Q96FS4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIPA1Q96FS4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.36■□□□□ 0.37
SIPA1Q96FS4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIPA1Q96FS4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 HMGN1P19-201ENST00000436976 333 ntBASIC17.34■□□□□ 0.37
SIPA1Q96FS4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms