Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 PMS2P1-201ENST00000431037 1228 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 RHOQP3-201ENST00000437982 621 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AP001094.4-201ENST00000579008 2176 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 LINC02012-201ENST00000608206 1725 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AL023806.1-201ENST00000603994 1649 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AC027601.4-201ENST00000611259 610 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AC060834.1-201ENST00000443027 2032 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD5Q8TDI0 AC104109.2-201ENST00000602919 1418 ntBASIC17.42■□□□□ 0.38
CHD5Q8TDI0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 FAM197Y3-203ENST00000618346 717 ntBASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 AC010507.1-201ENST00000633895 436 ntBASIC17.41■□□□□ 0.38
CHD5Q8TDI0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD5Q8TDI0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.4■□□□□ 0.38
CHD5Q8TDI0 ADH5P3-201ENST00000433842 1137 ntBASIC17.4■□□□□ 0.38
CHD5Q8TDI0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.4■□□□□ 0.38
CHD5Q8TDI0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms