Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 AC011270.2-201ENST00000624293 2550 ntBASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 AL845331.1-201ENST00000424978 1190 ntBASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 TSSC2-201ENST00000450217 709 ntBASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 KRT8P10-201ENST00000450021 1447 ntBASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 AC016396.2-201ENST00000562575 1417 ntBASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 LYSMD4-203ENST00000378904 2122 ntBASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEMA6DQ8NFY4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 AP000347.1-202ENST00000435868 847 ntBASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 MIR3180-1-201ENST00000580374 94 ntBASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 MIR3180-3-201ENST00000584616 94 ntBASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 AL121672.3-201ENST00000608644 468 ntBASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SEMA6DQ8NFY4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SEMA6DQ8NFY4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SEMA6DQ8NFY4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SEMA6DQ8NFY4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SEMA6DQ8NFY4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SEMA6DQ8NFY4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.21■□□□□ 0.02
SEMA6DQ8NFY4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SEMA6DQ8NFY4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms