Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 AL139400.1-201ENST00000366220 510 ntBASIC21.23■□□□□ 0.99
RTL9Q8NET4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 REXO1L3P-201ENST00000622202 1288 ntBASIC21.23■□□□□ 0.99
RTL9Q8NET4 AL513210.1-201ENST00000629608 234 ntBASIC21.23■□□□□ 0.99
RTL9Q8NET4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 AL513480.1-201ENST00000451731 511 ntBASIC21.23■□□□□ 0.99
RTL9Q8NET4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL9Q8NET4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.23■□□□□ 0.99
RTL9Q8NET4 AC093028.1-201ENST00000622998 982 ntBASIC21.23■□□□□ 0.99
RTL9Q8NET4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 AC092919.2-201ENST00000623631 1645 ntBASIC21.22■□□□□ 0.99
RTL9Q8NET4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 SLC25A1P3-201ENST00000395415 828 ntBASIC21.22■□□□□ 0.99
RTL9Q8NET4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.22■□□□□ 0.99
RTL9Q8NET4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL9Q8NET4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL9Q8NET4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 FAM8A3P-201ENST00000427218 844 ntBASIC21.21■□□□□ 0.99
RTL9Q8NET4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.21■□□□□ 0.99
RTL9Q8NET4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
RTL9Q8NET4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms