Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PAUPAR-201ENST00000630360 2965 ntBASIC16.91■□□□□ 0.3
HIPK4Q8NE63 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.91■□□□□ 0.3
HIPK4Q8NE63 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 AC007663.1-201ENST00000438948 1240 ntBASIC16.91■□□□□ 0.3
HIPK4Q8NE63 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 MIR4785-201ENST00000585005 73 ntBASIC16.91■□□□□ 0.3
HIPK4Q8NE63 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 AP000525.1-201ENST00000608286 694 ntBASIC16.91■□□□□ 0.3
HIPK4Q8NE63 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 MIR718-201ENST00000390190 70 ntBASIC16.9■□□□□ 0.3
HIPK4Q8NE63 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.9■□□□□ 0.3
HIPK4Q8NE63 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 C2orf69P3-201ENST00000565542 1120 ntBASIC16.9■□□□□ 0.3
HIPK4Q8NE63 AC010240.3-201ENST00000607688 395 ntBASIC16.9■□□□□ 0.3
HIPK4Q8NE63 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 AC010653.2-201ENST00000623505 997 ntBASIC16.9■□□□□ 0.3
HIPK4Q8NE63 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 TMEM191A-211ENST00000637163 1067 ntBASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK4Q8NE63 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.3
HIPK4Q8NE63 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HIPK4Q8NE63 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 AC009949.1-201ENST00000623048 1830 ntBASIC16.89■□□□□ 0.29
HIPK4Q8NE63 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HIPK4Q8NE63 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms