Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 RPS2P1-201ENST00000434010 821 ntBASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 ABCD1P5-201ENST00000445663 754 ntBASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 AC080080.1-201ENST00000625121 2420 ntBASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 ZNF259P1-201ENST00000407656 1365 ntBASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 RPS2P28-201ENST00000314255 741 ntBASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 AC108860.2-201ENST00000562760 2183 ntBASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 PMS2P7-201ENST00000506558 1336 ntBASIC18.22■□□□□ 0.51
CCDC33Q8N5R6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC33Q8N5R6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CCDC33Q8N5R6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 SIRPAP1-201ENST00000448467 1770 ntBASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms