Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PGBD3Q8N328 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
PGBD3Q8N328 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 METTL21AP1-201ENST00000438852 635 ntBASIC17.62■□□□□ 0.41
PGBD3Q8N328 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 AC008667.4-201ENST00000607370 168 ntBASIC17.62■□□□□ 0.41
PGBD3Q8N328 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PGBD3Q8N328 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PGBD3Q8N328 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 ALG1L5P-201ENST00000482043 771 ntBASIC17.61■□□□□ 0.41
PGBD3Q8N328 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 BX276092.7-203ENST00000637198 1536 ntBASIC17.61■□□□□ 0.41
PGBD3Q8N328 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PGBD3Q8N328 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD3Q8N328 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD3Q8N328 AC097637.2-201ENST00000624096 1997 ntBASIC17.6■□□□□ 0.41
PGBD3Q8N328 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD3Q8N328 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD3Q8N328 AP006288.1-201ENST00000446065 395 ntBASIC17.6■□□□□ 0.41
PGBD3Q8N328 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD3Q8N328 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 IGHV3-65-201ENST00000523210 341 ntBASIC17.6■□□□□ 0.41
PGBD3Q8N328 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.6■□□□□ 0.41
PGBD3Q8N328 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms